Package: erah
Type: Package
Version: 2.0.0
Author: Xavier Domingo-Almenara [aut, cre, cph], Jasen P. Finch [ctb],
        Adria Olomi [ctb], Sara Samino [aut], Maria Vinaixa [aut],
        Alexandre Perera [aut, ths], Jesus Brezmes [aut, ths], Oscar
        Yanes [aut, ths]
Title: Automated Spectral Deconvolution, Alignment, and Metabolite
        Identification in GC/MS-Based Untargeted Metabolomics
Depends: R (>= 3.4)
Imports: osd, HiClimR, igraph, signal, quantreg, methods, tibble,
        progress, future, furrr
Suggests: ncdf4, mzR, knitr, rmarkdown, prettydoc, covr, gcspikelite,
        testthat
Maintainer: Xavier Domingo-Almenara <xavier.domingoa@eurecat.org>
Description: Automated compound deconvolution, alignment across
        samples, and identification of metabolites by spectral library
        matching in Gas Chromatography - Mass spectrometry (GC-MS)
        untargeted metabolomics. Outputs a table with compound names,
        matching scores and the integrated area of the compound for
        each sample. Package implementation is described in
        Domingo-Almenara et al. (2016)
        <doi:10.1021/acs.analchem.6b02927>.
License: GPL (>= 2)
URL: http://metsyslab.com/, http://xdomingoal.github.io/erah-devel/
BugReports: https://github.com/xdomingoal/erah-devel/issues
biocViews: MassSpectrometry, Metabolomics
LazyData: yes
NeedsCompilation: yes
VignetteBuilder: knitr
RoxygenNote: 7.2.3
Encoding: UTF-8
Config/pak/sysreqs: libglpk-dev libxml2-dev libnetcdf-dev
Repository: https://xdomingoal.r-universe.dev
Date/Publication: 2024-02-09 15:03:00 UTC
RemoteUrl: https://github.com/xdomingoal/erah-devel
RemoteRef: HEAD
RemoteSha: 6319228133e4a2c87c0682415cdd37204b7e94be
Packaged: 2026-07-02 06:41:56 UTC; root